A hybrid explainable model based on advanced machine learning and deep learning models for classifying brain tumors using MRI images

Гибридная интерпретируемая модель на основе современных моделей машинного и глубокого обучения для классификации опухолей головного мозга по МР-изображениям
Md. Nahiduzzaman, Lway Faisal Abdulrazak, Hafsa Binte Kibria, Amith Khandakar, Mohamed Arselene Ayari, Md. Faysal Ahamed, Mominul Ahsan, Julfikar Haider, Mohammad Ali Moni, Marcin Kowalski
2025-01-10

MRI imagesSHAP explainabilitybrain tumor classificationdepthwise separable CNNridge regression extreme learning machine
Brain tumors present a significant global health challenge, and their early detection and accurate classification are crucial for effective treatment strategies. This study presents a novel approach combining a lightweight parallel depthwise separable convolutional neural network (PDSCNN) and a hybrid ridge regression extreme learning machine (RRELM) for accurately classifying four types of brain tumors (glioma, meningioma, no tumor, and pituitary) based on MRI images. The proposed approach enhances the visibility and clarity of tumor features in MRI images by employing contrast-limited adaptive histogram equalization (CLAHE). A lightweight PDSCNN is then employed to extract relevant tumor-specific patterns while minimizing computational complexity. A hybrid RRELM model is proposed, enhancing the traditional ELM for improved classification performance. The proposed framework is compared with various state-of-the-art models in terms of classification accuracy, model parameters, and layer sizes. The proposed framework achieved remarkable average precision, recall, and accuracy values of 99.35%, 99.30%, and 99.22%, respectively, through five-fold cross-validation. The PDSCNN-RRELM outperformed the extreme learning machine model with pseudoinverse (PELM) and exhibited superior performance. The introduction of ridge regression in the ELM framework led to significant enhancements in classification performance model parameters and layer sizes compared to those of the state-of-the-art models. Additionally, the interpretability of the framework was demonstrated using Shapley Additive Explanations (SHAP), providing insights into the decision-making process and increasing confidence in real-world diagnosis.
1
A hybrid PDSCNN–RRELM framework classifies four MRI categories: glioma, meningioma, no tumor, and pituitary tumors.
2
CLAHE enhances MRI tumor-feature visibility, while lightweight PDSCNN extracts tumor-specific patterns with reduced computational complexity.
3
Five-fold cross-validation produced average precision of 99.35%, recall of 99.30%, and accuracy of 99.22%.
4
SHAP explanations revealed the framework’s decision-making process, improving interpretability and confidence for potential clinical diagnosis.
5
The ridge-regression ELM component outperformed the pseudoinverse ELM and improved performance, parameter efficiency, and layer-size characteristics relative to state-of-the-art models.

Brain MRI images containing glioma, meningioma, pituitary tumors, or no tumor

Accurate and interpretable four-class brain-tumor classification, including tumor-specific feature extraction and model performance

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2025-01-10
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Md. Nahiduzzaman
Lway Faisal Abdulrazak
Hafsa Binte Kibria
Amith Khandakar
Mohamed Arselene Ayari
Md. Faysal Ahamed
Mominul Ahsan
Julfikar Haider
Mohammad Ali Moni
Marcin Kowalski
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