Graph Neural Networks for Graphs With Heterophily: A Survey

Графовые нейронные сети для графов с гетерофилией: обзор
Philip S. Yu, Ming Li, Shirui Pan, Yixin Liu, Di Jin, Yi Wang, Xin Zheng, Miao Zhang
2026-04-02

GNNs for heterophilic graphsgraph neural networksheterophilic graph learningheterophilyhomophily assumption
Recent years have witnessed fast developments of graph neural networks (GNNs) that have benefited myriad graph analytic tasks and applications. Most GNNs rely on the homophily assumption that nodes belonging to the same class are more likely to be connected. However, as a ubiquitous graph property in numerous real-world scenarios, heterophily, i.e., nodes with different labels tend to be linked, significantly limits the performance of tailor-made homophilic GNNs. Hence,GNNs for heterophilic graphsare gaining increasing research attention to enhance graph learning with heterophily. In this paper, we provide a comprehensive review of GNNs for heterophilic graphs. Specifically, we propose a systematic taxonomy that governs existing heterophilic GNN models, along with general summaries and detailed analyses. Furthermore, we discuss the relationship between heterophily and various graph research domains, aiming to facilitate the development of more effective GNNs across a spectrum of practical applications and learning tasks in the graph research community. In the end, we point out potential directions to advance and inspire future research and applications on heterophilic graph learning with GNNs.
1
Heterophily, where nodes with different labels tend to be linked, is a common real-world graph property that degrades performance of homophily-based GNNs.
2
The paper identifies potential future research directions to advance heterophilic graph learning with GNNs.
3
The paper presents a systematic taxonomy that organizes existing heterophilic GNN models, with general summaries and detailed analyses.
4
The survey discusses relationships between heterophily and other graph research domains to guide development of more effective GNNs for diverse applications.
5
There is growing research attention on designing GNNs specifically for heterophilic graphs to improve graph learning under heterophily.

Graph neural networks for heterophilic graphs

Methods, models, taxonomy, and performance aspects of GNNs addressing heterophily in graphs, including their relationships to graph research domains and directions to improve learning on heterophilic graphs

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2026-04-02
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Philip S. Yu
Ming Li
Shirui Pan
Yixin Liu
Di Jin
Yi Wang
Xin Zheng
Miao Zhang
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