Ten millennia of hepatitis B virus evolution

Десять тысячелетий эволюции вируса гепатита B
Susannah J. Salter, Antti Sajantila, Marcel Keller, Alessandra Sperduti, Megan Michel, Richard L. Burger, Lucy C. Salazar, Stefanie Eisenmann, Elizabeth A. Nelson, Adam B. Rohrlach, Alissa Mittnik, Aleksandr Khokhlov, Magdalena Żołędziewska, Susanne Friederich, Rafael Garrido Peña, Valery Khartanovich, Rodrigo Barquera, Kathrin Nägele, Tiago Ferraz, Joscha Gretzinger, Susanna Sabin, Luka Papac, Sophie Beckett, Elizabeth Popescu, Richard Mortimer, Guido Alberto Gnecchi‐Ruscone, Yadira Chinique de Armas, Silvia Teresita Hernández Godoy, Lyazzat Musralina, Maria A. Spyrou, Elena Batieva, Andrey A. Chizhevsky, Felix M. Key, Petr Velemínský, Vanessa Villalba‐Mouco, Louise Loe, Rachel Clarke, Alice Lyons, Ayshin Ghalichi, Jessica Pearson, Vladimir Slavchev, Carmen Alonso Fernández, Gabriel García Atiénzar, Kristin von Heyking, Raphaela Stahl, Luc Amkreutz, Philippe Lefranc, Alexey Kalmykov, Antje Wissgott, Vladimir Е. Maslov, Biaslan Ch. Atabiev, Luca Lai, Vittoria Schimmenti, Eirini Skourtanioti, Gunnar U. Neumann, Sandra Penske, Tara Ingman, Michal Feldman, Cody Parker, Franziska Aron, María Paz de Miguel Ibáñez, Alejandro Romero, Jan Nováček, Marieke S. van de Loosdrecht, Didier Binder, Maïté Rivollat, Eva Rosenstock, Cristina Tejedor Rodríguez, Íñigo García-Martínez de Lagrán, Marina K. Karapetian, Arthur Kocher, Ron Hübler, Florian van Bömmel, Maria Pfefferkorn, Kerttu Majander, Rezeda I. Tukhbatova, Evelyn K. Guevara, Karen Giffin, Mikhail S. Chaplygin, Vladimir V. Kufterin, Dmitry A. Stashenkov, Anna F. Kochkina, Héctor Arcusa-Magallón, José I. Royo-Guillén, Stéphane Rottier, Sacha Kacki, Sylvie Saintot, Elena Kaverzneva, Andrej B. Belinskiy, Petr Limburský, Michal Kostka, Diana I. Hernández-Zaragoza, Anatoly R. Kantorovich, Jessica F. Beckett, Michaela Langová, Alžběta Danielisová, Emma D. Zilivinskaya, Dmitry V. Vasil’ev, Masnav Navruzbekov, Micaela Álvarez Calmet
2021-10-08

Hepatitis B virus (HBV)Holocene Eurasian and Native American dispersalNeolithic transition and farmer-mediated spreadancient HBV genomesgenotype G reemergencephylogenetic dating (MRCA ~20,000–12,000 years ago)
Hepatitis B virus (HBV) has been infecting humans for millennia and remains a global health problem, but its past diversity and dispersal routes are largely unknown. We generated HBV genomic data from 137 Eurasians and Native Americans dated between ~10,500 and ~400 years ago. We date the most recent common ancestor of all HBV lineages to between ~20,000 and 12,000 years ago, with the virus present in European and South American hunter-gatherers during the early Holocene. After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely disseminated by early farmers that prevailed throughout western Eurasia for ~4000 years, declining around the end of the 2nd millennium BCE. The only remnant of this prehistoric HBV diversity is the rare genotype G, which appears to have reemerged during the HIV pandemic.
1
After the European Neolithic transition, Mesolithic HBV strains were replaced by a lineage likely spread by early farmers that dominated western Eurasia for ~4000 years.
2
HBV genomic data were generated from 137 ancient individuals dated ~10,500 to ~400 years ago across Eurasia and the Americas.
3
HBV was present in European and South American hunter-gatherers during the early Holocene.
4
That widespread prehistoric HBV lineage declined around the end of the 2nd millennium BCE.
5
The most recent common ancestor of all HBV lineages is dated between ~20,000 and 12,000 years ago.
6
The only surviving remnant of this prehistoric HBV diversity is rare genotype G, which appears to have reemerged during the HIV pandemic.

Hepatitis B virus (ancient HBV genomes from Eurasians and Native Americans dated ~10,500–400 years ago)

Evolutionary history, past diversity, temporal origin, and dispersal routes of HBV lineages over the last ten millennia, including lineage replacement after the European Neolithic and persistence/emergence of specific genotypes (e.g., genotype G)

Publication Details
Publication Date
2021-10-08
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Authors
Susannah J. Salter
Antti Sajantila
Marcel Keller
Alessandra Sperduti
Megan Michel
Richard L. Burger
Lucy C. Salazar
Stefanie Eisenmann
Elizabeth A. Nelson
Adam B. Rohrlach
Alissa Mittnik
Aleksandr Khokhlov
Magdalena Żołędziewska
Susanne Friederich
Rafael Garrido Peña
Valery Khartanovich
Rodrigo Barquera
Kathrin Nägele
Tiago Ferraz
Joscha Gretzinger
Susanna Sabin
Luka Papac
Sophie Beckett
Elizabeth Popescu
Richard Mortimer
Guido Alberto Gnecchi‐Ruscone
Yadira Chinique de Armas
Silvia Teresita Hernández Godoy
Lyazzat Musralina
Maria A. Spyrou
Elena Batieva
Andrey A. Chizhevsky
Felix M. Key
Petr Velemínský
Vanessa Villalba‐Mouco
Louise Loe
Rachel Clarke
Alice Lyons
Ayshin Ghalichi
Jessica Pearson
Vladimir Slavchev
Carmen Alonso Fernández
Gabriel García Atiénzar
Kristin von Heyking
Raphaela Stahl
Luc Amkreutz
Philippe Lefranc
Alexey Kalmykov
Antje Wissgott
Vladimir Е. Maslov
Biaslan Ch. Atabiev
Luca Lai
Vittoria Schimmenti
Eirini Skourtanioti
Gunnar U. Neumann
Sandra Penske
Tara Ingman
Michal Feldman
Cody Parker
Franziska Aron
María Paz de Miguel Ibáñez
Alejandro Romero
Jan Nováček
Marieke S. van de Loosdrecht
Didier Binder
Maïté Rivollat
Eva Rosenstock
Cristina Tejedor Rodríguez
Íñigo García-Martínez de Lagrán
Marina K. Karapetian
Arthur Kocher
Ron Hübler
Florian van Bömmel
Maria Pfefferkorn
Kerttu Majander
Rezeda I. Tukhbatova
Evelyn K. Guevara
Karen Giffin
Mikhail S. Chaplygin
Vladimir V. Kufterin
Dmitry A. Stashenkov
Anna F. Kochkina
Héctor Arcusa-Magallón
José I. Royo-Guillén
Stéphane Rottier
Sacha Kacki
Sylvie Saintot
Elena Kaverzneva
Andrej B. Belinskiy
Petr Limburský
Michal Kostka
Diana I. Hernández-Zaragoza
Anatoly R. Kantorovich
Jessica F. Beckett
Michaela Langová
Alžběta Danielisová
Emma D. Zilivinskaya
Dmitry V. Vasil’ev
Masnav Navruzbekov
Micaela Álvarez Calmet
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