Generative artificial intelligence in drug discovery: basic framework, recent advances, challenges, and opportunities

Генеративный искусственный интеллект в открытии лекарств: базовая структура, последние достижения, проблемы и возможности
M. Azim Ansari, Ling Shing Wong, Iqrar Ahmad, Vetriselvan Subramaniyan, Amit Gangwal, Abul Kalam Azad, Vinoth Kumarasamy
2024-02-07

de novo drug designgenerative artificial intelligencemolecular property predictionmolecule generationvirtual screening
There are two main ways to discover or design small drug molecules. The first involves fine-tuning existing molecules or commercially successful drugs through quantitative structure-activity relationships and virtual screening. The second approach involves generating new molecules through de novo drug design or inverse quantitative structure-activity relationship. Both methods aim to get a drug molecule with the best pharmacokinetic and pharmacodynamic profiles. However, bringing a new drug to market is an expensive and time-consuming endeavor, with the average cost being estimated at around $2.5 billion. One of the biggest challenges is screening the vast number of potential drug candidates to find one that is both safe and effective. The development of artificial intelligence in recent years has been phenomenal, ushering in a revolution in many fields. The field of pharmaceutical sciences has also significantly benefited from multiple applications of artificial intelligence, especially drug discovery projects. Artificial intelligence models are finding use in molecular property prediction, molecule generation, virtual screening, synthesis planning, repurposing, among others. Lately, generative artificial intelligence has gained popularity across domains for its ability to generate entirely new data, such as images, sentences, audios, videos, novel chemical molecules, etc. Generative artificial intelligence has also delivered promising results in drug discovery and development. This review article delves into the fundamentals and framework of various generative artificial intelligence models in the context of drug discovery via de novo drug design approach. Various basic and advanced models have been discussed, along with their recent applications. The review also explores recent examples and advances in the generative artificial intelligence approach, as well as the challenges and ongoing efforts to fully harness the potential of generative artificial intelligence in generating novel drug molecules in a faster and more affordable manner. Some clinical-level assets generated form generative artificial intelligence have also been discussed in this review to show the ever-increasing application of artificial intelligence in drug discovery through commercial partnerships.
1
AI models are widely applied in drug discovery tasks including molecular property prediction, molecule generation, virtual screening, synthesis planning, and repurposing.
2
Bringing a new drug to market is costly and slow, with average estimated cost around $2.5 billion, motivating computational approaches.
3
Generative AI has recently produced promising results in de novo drug design by generating novel chemical structures and accelerating discovery.
4
The review identifies challenges and ongoing efforts to fully harness generative AI for faster, more affordable novel drug molecule generation, and notes some clinical-level assets from generative AI collaborations.
5
Two principal drug discovery strategies exist: fine-tuning existing molecules via QSAR/virtual screening, and de novo molecule generation via inverse QSAR.

Generative artificial intelligence models applied to de novo small-molecule drug design

Generation and evaluation of novel drug-like small molecules (molecule generation, molecular property prediction, virtual screening, and related workflows) to accelerate and reduce cost of drug discovery

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2024-02-07
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M. Azim Ansari
Ling Shing Wong
Iqrar Ahmad
Vetriselvan Subramaniyan
Amit Gangwal
Abul Kalam Azad
Vinoth Kumarasamy
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