DNA barcodes for biosecurity: invasive species identification

ДНК-штрихкоды для обеспечения биобезопасности: идентификация инвазивных видов
Karen Armstrong, Shelley L. Ball
2005-09-15

DNA barcodesbiosecuritycox1 sequence barcodeinvasive alien speciesmolecular diagnostics
Biosecurity encompasses protecting against any risk through 'biological harm', not least being the economic impact from the spread of pest insects. Molecular diagnostic tools provide valuable support for the rapid and accurate identification of morphologically indistinct alien species. However, these tools currently lack standardization. They are not conducive to adaptation by multiple sectors or countries, or to coping with changing pest priorities. The data presented here identifies DNA barcodes as a very promising opportunity to address this. DNA of tussock moth and fruit fly specimens intercepted at the New Zealand border over the last decade were reanalysed using the cox1 sequence barcode approach. Species identifications were compared with the historical dataset obtained by PCR-RFLP of nuclear rDNA. There was 90 and 96% agreement between the methods for these species, respectively. Improvements included previous tussock moth 'unknowns' being placed to family, genera or species and further resolution within fruit fly species complexes. The analyses highlight several advantages of DNA barcodes, especially their adaptability and predictive value. This approach is a realistic platform on which to build a much more flexible system, with the potential to be adopted globally for the rapid and accurate identification of invasive alien species.
1
DNA barcodes based on cox1 sequences provide a promising approach for rapid and accurate identification of morphologically indistinct invasive species.
2
DNA barcodes provided finer resolution within fruit fly species complexes than the previous diagnostic method.
3
DNA barcoding improved classification of previously unidentified tussock moth specimens to family, genus, or species level.
4
Reanalysis of intercepted New Zealand tussock moth and fruit fly specimens showed 90% and 96% agreement, respectively, with historical PCR-RFLP identifications.
5
The adaptability and predictive value of DNA barcodes could support a flexible, globally adoptable biosecurity identification system.

DNA barcodes for intercepted tussock moth and fruit fly specimens used in invasive alien species identification

The accuracy, resolution, adaptability, and predictive value of cox1 sequence barcodes for rapid identification of morphologically indistinct invasive pest species

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2005-09-15
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Karen Armstrong
Shelley L. Ball
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