Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
Enrichr: комплексный веб-сервер для анализа обогащения наборов генов — обновление 2016 года
2016-05-03
SCID: 54.1/nya9kkem
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BED file uploadEnrichrclustergram visualizationgene set enrichment analysisgene set libraries
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Abstract (AI)
Enrichment analysis is a popular method for analyzing gene sets generated by genome-wide experiments. Here we present a significant update to one of the tools in this domain called Enrichr. Enrichr currently contains a large collection of diverse gene set libraries available for analysis and download. In total, Enrichr currently contains 180 184 annotated gene sets from 102 gene set libraries. New features have been added to Enrichr including the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization of the results as clustergrams. Overall, Enrichr is a comprehensive resource for curated gene sets and a search engine that accumulates biological knowledge for further biological discoveries. Enrichr is freely available at: http://amp.pharm.mssm.edu/Enrichr.
Key Findings
1
Enrichr added support for submitting fuzzy gene sets and uploading BED files for enrichment analysis.
2
Enrichr functions as a freely available resource and search engine for curated gene sets and accumulated biological knowledge.
3
The 2016 Enrichr update provides access to 180,184 annotated gene sets across 102 diverse gene set libraries.
4
The updated platform includes an improved application programming interface and clustergram-based visualization of enrichment results.
Research Object
Enrichr web server and its curated gene set libraries
Research Subject
gene set enrichment analysis capabilities, including library coverage, fuzzy-set and BED-file submission, API functionality, and result visualization
Publication Details
Publication Date
2016-05-03
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