Bioconductor: open software development for computational biology and bioinformatics
Bioconductor: открытая разработка программного обеспечения для вычислительной биологии и биоинформатики
2004-09-15
SCID: 54.1/re6uh38x
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Bioconductorbioinformaticscomputational biologyopen software developmentreproducible research
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Abstract (AI)
The Bioconductor project is an initiative for the collaborative creation of extensible software for computational biology and bioinformatics. The goals of the project include: fostering collaborative development and widespread use of innovative software, reducing barriers to entry into interdisciplinary scientific research, and promoting the achievement of remote reproducibility of research results. We describe details of our aims and methods, identify current challenges, compare Bioconductor to other open bioinformatics projects, and provide working examples.
Key Findings
1
A central goal is enabling remote reproducibility of computational biology research results.
2
Bioconductor is a collaborative initiative for developing extensible software in computational biology and bioinformatics.
3
Bioconductor seeks to lower barriers to interdisciplinary scientific research by providing accessible computational tools.
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The paper describes Bioconductor’s methods, challenges, comparisons with other open bioinformatics projects, and working examples.
5
The project aims to promote innovative software development and widespread use through open, collaborative practices.
Research Object
The Bioconductor software project (extensible open-source software for computational biology and bioinformatics)
Research Subject
open, collaborative development and use of extensible software for computational biology and bioinformatics, including reproducible research
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2004-09-15
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