CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection

Универсальная модель на основе CLIP для сегментации органов и обнаружения опухолей
Jie-Neng Chen, Zongwei Zhou, Bennett A. Landman, Alan Yuille, Yucheng Tang, Yongyi Lu, Jie Liu, Yixiao Zhang, Junfei Xiao, Yixuan Yuan
2023-10-01

Beyond The Cranial VaultCLIP-Driven Universal ModelContrastive Language-Image Pre-trainingMedical Segmentation Decathloncomputed tomographymulti-dataset trainingorgan segmentationtext embeddingtransfer learningtumor detection
An increasing number of public datasets have shown a marked impact on automated organ segmentation and tumor detection. However, due to the small size and partially labeled problem of each dataset, as well as a limited investigation of diverse types of tumors, the resulting models are often limited to segmenting specific organs/tumors and ignore the semantics of anatomical structures, nor can they be extended to novel domains. To address these issues, we propose the CLIP-Driven Universal Model, which incorporates text embedding learned from Contrastive Language-Image Pre-training (CLIP) to segmentation models. This CLIP-based label encoding captures anatomical relationships, enabling the model to learn a structured feature embedding and segment 25 organs and 6 types of tumors. The proposed model is developed from an assembly of 14 datasets, using a total of 3,410 CT scans for training and then evaluated on 6,162 external CT scans from 3 additional datasets. We rank first on the Medical Segmentation Decathlon (MSD) public leaderboard and achieve state-of-the-art results on Beyond The Cranial Vault (BTCV). Additionally, the Universal Model is computationally more efficient (6× faster) compared with dataset-specific models, generalized better to CT scans from varying sites, and shows stronger transfer learning performance on novel tasks.
1
Incorporating CLIP text embeddings into segmentation models enables capturing anatomical relationships and structured feature embeddings for segmentation.
2
The CLIP-Driven Universal Model segments 25 organs and 6 tumor types using combined supervision from 14 datasets (3,410 CT scans).
3
The Universal Model is computationally more efficient, running approximately 6× faster than dataset-specific models.
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The model generalizes better to CT scans from varying sites and exhibits stronger transfer learning performance on novel tasks.
5
Trained model evaluated on 6,162 external CT scans from 3 datasets, achieving top rank on the MSD public leaderboard and state-of-the-art on BTCV.

CLIP-Driven Universal Model for organ segmentation and tumor detection applied to CT scans

Ability of the model to segment 25 organs and detect 6 tumor types by incorporating CLIP text embeddings to capture anatomical relationships, including generalization across datasets/sites, computational efficiency, and transfer learning performance

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2023-10-01
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Authors
Jie-Neng Chen
Zongwei Zhou
Bennett A. Landman
Alan Yuille
Yucheng Tang
Yongyi Lu
Jie Liu
Yixiao Zhang
Junfei Xiao
Yixuan Yuan
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