The SARS-CoV-2 Y453F mink variant displays a pronounced increase in ACE-2 affinity but does not challenge antibody neutralization

Вариант SARS-CoV-2 Y453F у норок демонстрирует значительное повышение сродства к ACE2, но не снижает нейтрализацию антителами
Rafael Bayarri‐Olmos, Anne Rosbjerg, Laust Bruun Johnsen, Charlotte Helgstrand, Theresa Bak-Thomsen, Peter Garred, Mikkel‐Ole Skjoedt
2021-01-01

ACE-2 receptor affinitySARS-CoV-2 Y453F variantantibody neutralizationmink transmissionreceptor-binding domain
Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 from humans to animals has been reported for many domesticated species, including farmed minks. The identification of novel spike gene mutations appearing in minks has raised major concerns about potential immune evasion and challenges for the global vaccine strategy. One genetic variant, known as "cluster five," arose among farmed minks in Denmark and resulted in a complete shutdown of the world's largest mink production. However, the functional properties of this new variant are not established. Here we present functional data on the cluster-five variant, which contains a mutation resulting in a Y453F residue change in the receptor-binding domain (RBD) of the spike protein. Using an ELISA-based angiotensin-converting enzyme-2/RBD inhibition assay, we show that the Y453F variant does not decrease established humoral immunity from previously infected individuals or affect the neutralizing antibody response in a vaccine mouse model based on the original Wuhan strain RBD or spike as antigens. However, biolayer interferometry analysis demonstrates that it binds the human angiotensin-converting enzyme-2 receptor with a 4-fold higher affinity than the original strain, suggesting an enhanced transmission capacity and a possible challenge for viral control. These results also indicate that the rise in the frequency of the cluster-five variant in mink farms might be a result of the fitness advantage conferred by the receptor adaptation rather than evading immune responses.
1
The cluster-five variant’s increased prevalence in mink farms may reflect receptor-adaptation fitness advantages rather than immune escape.
2
The mink-associated SARS-CoV-2 cluster-five variant carries a Y453F substitution in the spike receptor-binding domain.
3
The variant does not reduce antibody-mediated immunity from previously infected individuals in an ACE2/RBD inhibition assay.
4
Vaccine-induced neutralizing antibody responses targeting the original Wuhan strain RBD or spike remain effective against Y453F.
5
Y453F increases binding affinity for human ACE2 by fourfold compared with the original SARS-CoV-2 strain.

The SARS-CoV-2 cluster-five mink variant carrying the Y453F mutation in the spike RBD

Its ACE2 receptor-binding affinity, antibody neutralization, and fitness advantage associated with receptor adaptation

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2021-01-01
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Rafael Bayarri‐Olmos
Anne Rosbjerg
Laust Bruun Johnsen
Charlotte Helgstrand
Theresa Bak-Thomsen
Peter Garred
Mikkel‐Ole Skjoedt
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