Catalytic Efficiency of Basidiomycete Laccases: Redox Potential versus Substrate-Binding Pocket Structure

Каталитическая эффективность лакказ базидиомицетов: окислительно-восстановительный потенциал и структура кармана связывания субстрата
Olga A. Glazunova, N. A. Trushkin, Konstantin V. Moiseenko, I. S. Filimonov, Т. В. Федорова
2018-04-09

Basidiomycete laccasesLignan oxidationPhenolic dyesRedox potentialSubstrate-binding pocket
Laccases are copper-containing oxidases that catalyze a one-electron abstraction from various phenolic and non-phenolic compounds with concomitant reduction of molecular oxygen to water. It is well-known that laccases from various sources have different substrate specificities, but it is not completely clear what exactly provides these differences. The purpose of this work was to study the features of the substrate specificity of four laccases from basidiomycete fungi Trametes hirsuta, Coriolopsis caperata, Antrodiella faginea, and Steccherinum murashkinskyi, which have different redox potentials of the T1 copper center and a different structure of substrate-binding pockets. Enzyme activity toward 20 monophenolic substances and 4 phenolic dyes was measured spectrophotometrically. The kinetic parameters of oxidation of four lignans and lignan-like substrates were determined by monitoring of the oxygen consumption. For the oxidation of the high redox potential (>700 mV) monophenolic substrates and almost all large substrates, such as phenolic dyes and lignans, the redox potential difference between the enzyme and the substrate (ΔE) played the defining role. For the low redox potential monophenolic substrates, ΔE did not directly influence the laccase activity. Also, in the special cases, the structure of the large substrates, such as dyes and lignans, as well as some structural features of the laccases (flexibility of the substrate-binding pocket loops and some amino acid residues in the key positions) affected the resulting catalytic efficiency.
1
For high-redox-potential monophenolic substrates (>700 mV) and most large substrates, the enzyme–substrate redox potential difference (ΔE) was the primary determinant of oxidation activity.
2
For low-redox-potential monophenolic substrates, ΔE did not directly determine laccase activity.
3
Four basidiomycete laccases showed differing substrate specificities associated with both T1-copper redox potentials and substrate-binding pocket structures.
4
Laccase substrate-binding pocket flexibility and key amino acid residues also modulated catalytic efficiency for some large substrates.
5
Substrate structure influenced catalytic efficiency for phenolic dyes and lignans in specific cases.

Four basidiomycete fungal laccases from Trametes hirsuta, Coriolopsis caperata, Antrodiella faginea, and Steccherinum murashkinskyi

Catalytic efficiency and substrate specificity in relation to T1 copper redox potential, substrate structure, and substrate-binding pocket features

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2018-04-09
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Olga A. Glazunova
N. A. Trushkin
Konstantin V. Moiseenko
I. S. Filimonov
Т. В. Федорова
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