RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences

Andrej Šali, Brian P. Hudson, Alexander Rose, David S. Goodsell, John Westbrook, S.K. Burley, Charmi Bhikadiya, Chunxiao Bi, Li Chen, Luigi Di Costanzo, Cole Christie, José M. Duarte, Shuchismita Dutta, Zukang Feng, Sutapa Ghosh, Rachel Kramer Green, Vladimir Guranović, Dmytro Guzenko, Yu‐He Liang, Robert Lowe, Ezra Peisach, Chris Randle, Monica Sekharan, Chenghua Shao, Yi‐Ping Tao, Maria Voigt, Jasmine Young, Christine Zardecki, Marina A. Zhuravleva, Yana Rose, Joan Segura, Sebastian Bittrich, Catherine L. Lawson, G.V. Crichlow, Kenneth Dalenberg, Sai J. Ganesan, Harry Namkoong, Irina Persikova
2020-11-17

SCID:  54.1/yhpfwk49
The Research Collaboratory for Structural Bioinformatics Protein Data Bank (RCSB PDB), the US data center for the global PDB archive and a founding member of the Worldwide Protein Data Bank partnership, serves tens of thousands of data depositors in the Americas and Oceania and makes 3D macromolecular structure data available at no charge and without restrictions to millions of RCSB.org users around the world, including >660 000 educators, students and members of the curious public using PDB101.RCSB.org. PDB data depositors include structural biologists using macromolecular crystallography, nuclear magnetic resonance spectroscopy, 3D electron microscopy and micro-electron diffraction. PDB data consumers accessing our web portals include researchers, educators and students studying fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences. During the past 2 years, the research-focused RCSB PDB web portal (RCSB.org) has undergone a complete redesign, enabling improved searching with full Boolean operator logic and more facile access to PDB data integrated with >40 external biodata resources. New features and resources are described in detail using examples that showcase recently released structures of SARS-CoV-2 proteins and host cell proteins relevant to understanding and addressing the COVID-19 global pandemic.
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Publication Date
2020-11-17
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Authors
Andrej Šali
Brian P. Hudson
Alexander Rose
David S. Goodsell
John Westbrook
S.K. Burley
Charmi Bhikadiya
Chunxiao Bi
Li Chen
Luigi Di Costanzo
Cole Christie
José M. Duarte
Shuchismita Dutta
Zukang Feng
Sutapa Ghosh
Rachel Kramer Green
Vladimir Guranović
Dmytro Guzenko
Yu‐He Liang
Robert Lowe
Ezra Peisach
Chris Randle
Monica Sekharan
Chenghua Shao
Yi‐Ping Tao
Maria Voigt
Jasmine Young
Christine Zardecki
Marina A. Zhuravleva
Yana Rose
Joan Segura
Sebastian Bittrich
Catherine L. Lawson
G.V. Crichlow
Kenneth Dalenberg
Sai J. Ganesan
Harry Namkoong
Irina Persikova
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