Integrated Whole-Exome and Transcriptome Sequencing of Sporadic Parathyroid Adenoma

Комплексное полное экзомное и транскриптомное секвенирование спорадической аденомы околощитовидной железы
Ya Hu, Xiang Zhang, Ou Wang, Ming Cui, Xiaobin Li, Mengyi Wang, Surong Hua, Quan Liao
2021-05-14

GCM2RNA sequencingsporadic parathyroid adenomaunsupervised consensus clusteringwhole-exome sequencing
Purpose: Hyperparathyroidism is the third most common endocrine disease. Parathyroid adenoma (PA) accounts for approximately 85% of cases of primary hyperparathyroidism, but the molecular mechanism is not fully understood. Herein, we aimed to investigate the genetic and transcriptomic profiles of sporadic PA. Methods: Whole-exome sequencing (WES) and transcriptome sequencing (RNA-seq) of 41 patients with PA and RNA-seq of 5 normal parathyroid tissues were performed. Gene mutations and characterized expression changes were identified. To elucidate the molecular mechanism underlying PA, unsupervised consensus clustering of RNA-seq data was performed. The correlations between the sequencing data and clinicopathological features of these patients were analyzed. Results: , which had not been reported in PA, was found in 4 samples. RNA-seq showed that the expression levels of 84 genes were upregulated and 646 were downregulated in PA samples compared with normal samples. Unsupervised clustering analysis of RNA-seq data clustered these patients into 10 subgroups related to mutation or abnormal expression of a group of potential pathogenic genes. Conclusion: mutations in PA were revealed. According to the RNA-seq data clustering analysis, cyclin D1, β-catenin, VDR, CASR and GCM2 may be important factors contributing to the PA gene expression profile.
1
A mutation not previously reported in parathyroid adenoma was identified in four tumor samples.
2
Compared with normal tissues, parathyroid adenomas showed 84 upregulated and 646 downregulated genes.
3
Cyclin D1, β-catenin, VDR, CASR, and GCM2 may contribute importantly to parathyroid adenoma gene-expression profiles.
4
Integrated whole-exome and transcriptome sequencing was performed in 41 sporadic parathyroid adenomas and five normal parathyroid tissues.
5
Unsupervised transcriptomic clustering divided parathyroid adenomas into 10 subgroups associated with mutations or abnormal expression of potential pathogenic genes.

Sporadic parathyroid adenoma and normal parathyroid tissue

Genetic mutations, transcriptomic expression changes, molecular subgroups, and their associations with clinicopathological features in sporadic parathyroid adenoma

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2021-05-14
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Authors
Ya Hu
Xiang Zhang
Ou Wang
Ming Cui
Xiaobin Li
Mengyi Wang
Surong Hua
Quan Liao
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